The BioImage Archive at EMBL-EBI stores and distributes biological images that are useful to life-science researchers. https://xitter.cf/t.co/NPSl9VYlyK.
Joined May 2021
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BioImage Archive retweeted
🚨 Save the Date! 🚨
AI4Life & @GloBIAS_ are hosting a 4-part webinar series to showcase AI4Life services and lessons learned.
📅 When: Feb 13, Apr 10, Jun 12, Aug 14
🖥️ How: Online | 🎥 Recorded
🔗 Registration: bit.ly/registration-globias-…
BioImage Archive retweeted
Deadline extension alert! You now have until 19 January to apply for this course that will show how public bioimaging data resources, centred around the @BioimageA, enable and enhance machine learning based image analysis: ebi.ac.uk/training/events/mi…
ALT Course at EMBL-EBI Microscopy data analysis: machine learning and the BioImage Archive 31 Mar - 4 Apr 2025 Virtual
BioImage Archive retweeted
Looking for a recipe for depositing bioimage #data in the @BioimageA? Check out the step-by-step process developed by #EuroBioImaging's FAIR Image Data Steward published in @ELIXIREurope's #FAIRdata Cookbook⤵️
faircookbook.elixir-europe.o…
BioImage Archive retweeted
Wrapping up a fantastic week at the #BioHackEU24 🎉 Project 17 worked (also) on the future integration of @BioimageA and @bioimageio with #useGalaxy, which will enable automatic import of both images and #AI models, streamlining automated #ImageAnalysis workflows.
BioImage Archive retweeted
Day 1 of the #foundingGIDE Community Event wrapped up with a dynamic panel on open science and image #DataManagement.
Representatives from @EuroBioImaging, @UNESCO, @NIG_idenken, @EMBL, @emblebi and @zeiss_micro discussed data accessibility and #Interoperability in #bioimaging
BioImage Archive retweeted
Life scientists! The 3rd (and last) AI4Life Open Call is officially open! 🎉 We are offering deep learning support for bioimage analysis. Apply now!
🔗 ai4life.eurobioimaging.eu/th…
⏳ Deadline: December 10, 2024
@REA_research #AI #Bioimaging #Imaging #ImageAnalysis #DeepLearning
ALT Open Call for Bioimage Analysis Support - Do you need help applying Deep Learning to your research? Apply by December 10, 2024 https://ai4life.eurobioimaging.eu/third-open-call/ [email protected] https://ai4life.eurobioimaging.eu/
BioImage Archive retweeted
#foundingGIDE Community Event is ON 📢 hosted by @riken_en in Okazaki 🇯🇵
Looking at 1.5 days full of insights into how we as a community can enhance image data #interoperability, harmonizing #metadata and #ontology to lay the foundations of a Global Image Data Ecosystem #GIDE!
BioImage Archive retweeted
How can you take your data one important step closer to #FAIRdata 🤔? Check out #EuroBioImaging's FAIR image data decision tree🌳- designed to guide you in the selection of appropriate repositories.
Separate trees exist for different image data types!
Check it out⤵️
zenodo.org/records/13945179
BioImage Archive retweeted
If you didn't yet have enough good reasons to share your bioimage data, Matthew (@BioimageA), Josh (@notjustmoore), Erin (@tuesdaystitches), Assaf (@AssafZaritsky) and I are here with squirrel drawings to convince you that you should do it:
journals.biologists.com/jcs/…
BioImage Archive retweeted
@BioimageA is a key partner in AI4Life, contributing significantly to the standardization of metadata for AI-ready datasets—a highly relevant topic in the bioimaging community! 🔥
Check out the preprint that details this work: arxiv.org/abs/2311.10443
BioImage Archive retweeted
There’s still time to join tomorrow’s #webinar to discover the utilisation of #WebAtlas and @BioimageA in visualising #spatialtranscriptomics and imaging data. Registration is free but essential: ebi.ac.uk/training/events/vi… #singlecell #DataScience
@sangerinstitute @bayraktar_lab
ALT Graphics image showing webinar at EMBL-EBI about Visualising integrated single cell and spatial transcriptomics datasets. The webinar will run on 09 October 2024 at 15:30 BST. The speakers are Omer Bayraktar and Aybuke Kupcu Yoldas. Image credit: Karen Arnott, EMBL-EBI
BioImage Archive retweeted
📢Frontiers in Bioimaging 2024: Book now!
Don't miss this great meeting, focusing on latest developments in both optical and electron microscopy, as well as image analysis.
Register now: rms.org.uk/rms-event-calenda…
ALT Promotional image for Frontiers in Bioimaging 2024. White text giving event name and date (11-12 Nov) over biological micrograph with blue, green and red colours prominent.
BioImage Archive retweeted
El periodo de aplicaciones ha iniciado.
Aplicaremos mejores prácticas en el uso de recursos públicos de bioimágenes, como @BioimageA e #IDR, dando pie al análisis de bioimágenes utilizando metodologías basadas en aprendizaje automático 🍃🐭🦠🐠🔬🖥️⌨️🤖
Apply for this course to learn how to best use public bioimaging data resources, centred around the BioImage Archive, to enable and enhance machine learning based image analysis.
Find out more: ebi.ac.uk/training/events/mi…
Limited registration fee waivers are available.
ALT Course at EMBL-EBI Microscopy data analysis: machine learning and the BioImage Archive 31 Mar - 4 Apr 2025 Virtual
BioImage Archive retweeted
Join our #webinar next week to discover #WebAtlas, a tool for visualising #SpatialTranscriptomics data and #BioImageArchive, an #OpenAccess data archive for biological imaging data. Registration is free but essential: ebi.ac.uk/training/events/vi… #singlecell #spatialomics #DataScience
ALT Graphics image showing webinar at EMBL-EBI about Visualising integrated single cell and spatial transcriptomics datasets. The webinar will run on 09 October 2024 at 15:30 BST. The speakers are Omer Bayraktar and Aybuke Kupcu Yoldas. Image credit: Karen Arnott, EMBL-EBI
BioImage Archive retweeted
What an amazing project 🤩! With BY-COVID, we mobilised multiple valuable COVID-19 image datasets to @BioImageA, who implemented recognition for the important role of Data Stewards towards sharing #FAIRdata. Check out all the project outcomes in this beautiful brochure ⤵️
🙌 The BY-COVID project was launched in autumn 2021 to support the response to #COVID19 and preparedness for future #infectiousdisease outbreaks.
✨ Check our highlight success stories in the past three years: by-covid.org/news/by-covid-s…
@HorizonEU @isidore_eu
BioImage Archive retweeted
Check out @BioimageA selection of studies with individual images that can be viewed 🚨in-browser.
This gallery is showcasing one of the advantages of #OMEZarr file format☁️ to visualize and interact with image data directly in the browser, no download!
ebi.ac.uk/bioimage-archive/g…
BioImage Archive retweeted
🚀 Join us at #GBI_EoE2024 in Okazaki, Japan!
🗓 Oct 29-31, 2024
🔎 Topic: Image Data Horizons - Global Strategies for Accessible Knowledge
📣 DEADLINE EXTENDED: Register & submit abstracts by Aug 31st!
Connect, collaborate, and advance global image data practices! 🌍🔬
BioImage Archive retweeted
🎬 We're launching a new video series: "Meet the team"! Get ready to meet the faces behind AI4Life as they share their roles in the project. This is just the first episode. Stay tuned for more!
youtu.be/B7DAUgnWRdw
BioImage Archive retweeted
Innovation in imaging challenges the #FAIR principles due to hundreds of propietary file formats. To address this @openmicroscopy developed #OMENGFF and at #OME2024 a new challenge was proposed: OME 2024 NGFF Challenge - convert a significant volume of bioimaging data to #OMEZarr
BioImage Archive retweeted
Recent work by the FIMM High Content Imaging and Analysis (FIMM-HCA) team has been featured as a @EuroBioImaging success story. The dataset containing raw images and segmentation masks is now available for anyone to view and reuse on the @BioimageA: eurobioimaging.eu/news/combi…
We believe in #FAIRdata sharing! Here's a @BYCOVID_eu success story for data mobilisation featuring #EuroBioImaging FAIR Image Data Steward & our Node colleague Lassi Paavolainen @FIMM_UH @FiAMNode. Check out a huge COVID-19 #dataset shared in @BioimageA⤵️
eurobioimaging.eu/news/combi…
