Assistant Professor, Gilbert S. Omenn Department of Computational Medicine & Bioinformatics, University of Michigan

Joined November 2015
🧠✨Excited to share our @Cancer_Cell Preview: “Spatial Patterns of Glioblastoma”! @Cong992 and I discuss how uncovering tumor cell spatial organization and interactions can reveal new paths for diagnosis and treatment. authors.elsevier.com/a/1m8Ka…
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Spatial transcriptomics meets complex analysis – our new method Belayer models spatial gene expression in layered tissues, now published in @CellSystemsCP. Work led by @Cong992 and @uthsavc with Shirley Zhang. 1/6 authors.elsevier.com/a/1fxla…
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Happy to share our paper (academic.oup.com/mbe/advance……) on identifying transcription regulatory sequences (TRSs) and genes in coronavirus genomes, which also appeared in #RECOMB2022. This started as a course project by @psashittal and @ZHANG_Chuanyi in my bioinformatics class. (1/n)
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Algorithm rapidly finds anomalies in gene expression data & works to identify and correct mistakes it may have made. To read more, visit our website: bit.ly/2OSBmRc
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Yutong Qiu (@yutong_qiu from @CMUCompBio) giving a talk at #WABI2019 on her paper with Cong Ma (@Cong992) introducing the "Multiple Compatible Arrangements Problem" (MCAP) to find structural variants from gene expression sequencing (RNA-seq). dx.doi.org/10.4230/LIPIcs.WA…
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Scallop software from @CMUCompBio reconstructs RNA transcripts more accurately, will improve understanding of gene expression. @NatureBiotech bit.ly/2jn9aKi
Thks for all the support! In case is not obvious, the accusations regarding Salmon are false, see detailed response: bit.ly/SalmonResponse
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