Biophysical Society affiliated Second Student Chapter in Asia
IISER Kolkata
Joined March 2021
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Gangeya Student Chapter retweeted
Paper2Agent brings research papers ‘to life.’
This open tool from @Stanford transforms static papers into interactive AI assistants that can explain and apply their methods.
It builds on the MCP and works in 2 layers:
- Paper2MCP: Extracts the paper’s methods and code into an MCP server.
- Agent layer: Links the MCP server to a chat agents.
The result is a real conversational assistant for the paper.
▪️ Paper2Agent has already worked impressively for agents that use AlphaGenome, Scanpy, and TISSUE tools.
Here are the details 🧵
AlEx 2025 on March 18 was a resounding success. A huge thank you to all participants, speakers, and volunteers for making this event enriching and inspiring. Your enthusiasm drives the spirit of scientific exploration.
@BiophysicalSoc @iiserkol #Biophysics #studentchapter
Don’t miss *AlEx 2025*, March 18, 2025 , Organized by Team Gāṅgeya,@GangeyaChapter the Student Chapter of Eastern India.
Join us for an exciting day of cutting-edge insights in biophysics.
@BiophysicalSoc
#Biophysicsweek
#studentchapter
@iiserkol
Gangeya Student Chapter retweeted
My lab recently built MolModa, a free, browser-based molecular docking tool. No installs, no logins—just docking that runs locally for speed and security. I hope you’ll give it a try and help spread the word! durrantlab.com/molmoda#MolMo… #MolecularDocking #CADD #ComputationalBiology
Gangeya Student Chapter retweeted
Molecular dynamics requires a lot of expert knowledge to set-up and analyze simulations. We set out to automate it with LLM agents: MDCrow!
Gangeya Student Chapter retweeted
Announcing AlphaFold 3: our state-of-the-art AI model for predicting the structure and interactions of all life’s molecules. 🧬
Here’s how we built it with @IsomorphicLabs and what it means for biology. 🧵 dpmd.ai/3URDiNo
Gangeya Student Chapter retweeted
Excited to announce the offline celebration of International Biophysics Week on March 27th,2024 @GangeyaChapter focusing on membrane biophysics! Join us for engaging discussions!
#BiophysicsWeek @BiophysicalSoc @iiserkol
Excited to announce the offline celebration of International Biophysics Week on March 27th,2024 @GangeyaChapter focusing on membrane biophysics! Join us for engaging discussions!
#BiophysicsWeek @BiophysicalSoc @iiserkol
Gangeya Student Chapter retweeted
Exploring the Alternative Conformation of a Known Protein Structure Based on Contact Map Prediction
pubs.acs.org/doi/10.1021/acs…
#JCIM Vol64 Issue1 #Bioinformatics
Gangeya Student Chapter retweeted
For those who wanted the code, it is available (and also improvable) at this link: github.com/profConradi/eigen…
In this brief article, you will find some additional explanations about eigenvalues figures: ucm.es/imi/boletin00104#1+40…
Gangeya Student Chapter retweeted
Condition of a PhD student, after her/his supervisor suggests to carry out a new kind of research experiment..
We are back with the International Biophysics Week Celebration 2023. Use the Google meet link: meet.google.com/shj-kzsr-pat to join us tomorrow from 10.50 am. Looking forward to your active participation...
#BiophysicsWeek @BiophysicalSoc @iiserkol
Gangeya Student Chapter retweeted
We are looking for a #postdoc (Institute-funded PDF) who will be working on MD simulations, enhanced sampling, ML methods, & their application in chemistry and materials. (webpage: sites.google.com/view/tarakk…)
Details here: chemistry.iitd.ac.in/news/12
Pls apply/RT #compchem
Gangeya Student Chapter retweeted
SynapseML unifies several existing ML frameworks and new @microsoft algorithms in a single, scalable API, with the goal of simplifying the creation of massively scalable machine learning pipelines.
Today we launched SynapseML v0.10.0 with 175-billion parameter @OpenAI language models, full support for @dotnet, integration with @MLflow, and much more. Check out the full release notes, leave a star, and explore SnyapseML: msft.it/6016j3QHA
Gangeya Student Chapter retweeted
Biophysics at the Dawn of Exascale Computers thematic meeting is underway in Hamburg! #BPShamburg2022
Gangeya Student Chapter retweeted
1/5 Symmetric Molecular Dynamics (symd) is MD where positions are always symmetric. It can be used to crystallize w/ any symmetry group. In our first work, we use it to make an atlas of all stable Lennard-Jones solids
Paper: arxiv.org/abs/2204.01114
Code: github.com/whitead/symd
Biophysics week 2022 celebration.
The day had exiting talks and insightful discussion.
@BiophysicalSoc
@iiserkol
Biophysics Week Celebration on 25th March 2022. Registration link: forms.gle/MPzbhgoRTED7QX569
@iiserkol
