Associate Member (Associate Professor) of Radiology @StJude | @GoogleResearch Scholar | @theNCI @BIG_Harvard_PhD @Trinity_U alum
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Joined September 2013
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Our New England Journal of Medicine AI Case Report evaluating histopathology slide search engines on unseen patient cases is out: linkedin.com/feed/update/urn…
Our new preprint (led by super star PhD student Lucy Pham) on leveraging protein language models to enable peptide sequencing is out! linkedin.com/posts/jacoblube…
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Second year PhD candidate in my group @jp_veerla is off to @GoogleResearch to work on Gemini model safety this summer. Congratulations Jai! linkedin.com/posts/jacoblube…
Two new computational scRNA-seq preprints from my group: linkedin.com/posts/jacoblube…
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We partnered with @UCLAHealth to investigate how PRS313, a polygenetic risk score, predicted breast cancer across 18,637 diverse American women. We subtype HR+ & HER2+ breast cancers based on Rx data from EHR & show ethnicity dependent efficacy. Details: linkedin.com/posts/jacoblube…
Our paper "A SSIM Guided cGAN Architecture For Clinically Driven Generative Image Synthesis of Multiplexed Spatial Proteomics Channels" has been accepted at the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology!
linkedin.com/posts/jacoblube…
Our new preprint "Multimodal Pathology Image Search Between H&E Slides and Multiplexed Immunofluorescent Images" is out on arXiv! linkedin.com/posts/jacoblube…
Our paper on interpretable highly compressed VAE latent spaces for pathology H&E slide search is out (IEEE ISBI 2023 Proceedings): linkedin.com/posts/jacoblube…
Congratulations!! I look forward to seeing what great science you do next.
Excited to announce that I'll be defending my PhD dissertation on April 28th and starting at postdoc at @DeboraMarksLab this summer!
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We are recruiting 9 (!) TT/T faculty members at
@cseuta
@mavengineering
@utarlington
this year in NLP, vision, biomedical applications, robotics, computer systems architecture, networking, cyber-physical systems, SWE, security, and privacy!! Apply below:
uta.peopleadmin.com/postings…
Our department is highly collegial and located at one of the fastest growing R1 Universities. Start up can be supplemented with an extra $300k utsystem.edu/offices/academi… thanks to @utsystem's endowment growth texasstandard.org/stories/su…
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Fantastic! I am excited to see how this new mechanism of publication changes the practice of science for the better.
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UT System being projected by Bloomberg to surpass Harvard as the worlds wealthiest University.
bloomberg.com/graphics/2022-…
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It was superb hosting @UTAPrezCowley in @mavsMICHI where 6 postdocs and PhD students in my @cseuta group (Mohammad Nasr, Anne Alsup, Jai Veerla, Md "Saurav" Jillur Rahman, Avishek Das, and Michael Robben PhD) gave great lightning talks about their @CPRITTexas research projects!
Dr. Luber and Dr. Weidanz students presented their research on cancer - with a long term goal of creating Individualized drugs for individualized treatment of patients cancer. Shown is Aviashek who shared his work using machine learning. @cseuta @UTABiologyDept @mavsMICHI
I could not recommend a better lab to do a postdoc in. Working with @PengJiang20 launched my faculty career!
Dear All, My Lab has a postdoc position available in Bioinformatics and Cancer Data Sciences. I would sincerely appreciate it if you can forward the following advertisement to young talents: ccr.cancer.gov/careers/post-…
Congratulations to the first PhD *Candidate* in my lab, @sadegh_nasr, who passed his qualifying examination today! Mohammad is co-advised by Manfred Huber and is exploring how Deep Bayesian models (both value and structure learning) can be applied to multimodal cancer data.
Check out this phenomenal work from @PengJiang20's lab at the @theNCI!
We are very excited to release our Tres framework to evaluate T-cell anti-tumor efficacy, and FIBP as a candidate immunotherapy target.
The paper is published on Nature Medicine: nature.com/articles/s41591-0…
The Tres server is available at: resilience.ccr.cancer.gov
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This is a blast from the past! If I recall correctly, this was at an excellent symposium at Penn organized by @GreeneScientist circa 2015.
#ExtremeThrowback to the good old days with some of the brightest minds around! Proud to be a part of the extended @OlgaTroyanskaya lab! 😀
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Proud to be a @utarlington faculty member. Higher education should be a vehicle for upward social mobility.
UT Arlington to Cover Tuition for Undergraduate Students With Family Incomes Under $85,000 on.nbcdfw.com/85QkLLE
