Assistant Professor of Teaching in the Dept. of Microbiology & Plant Pathology @UCRiverside.
Riverside, CA
Joined August 2012
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Jason Rothman retweeted
I picked up a carton of milk from the store this week that had H5N1 influenza in it.
>150 million copies/liter!
Thankfully, it was safe to drink because the milk was pasteurized, so I’m not saying what brand.
Takehome: DON’T DRINK RAW MILK.
Jason Rothman retweeted
We released our latest metagenomics preprint. I’m really excited about this study.
The unofficial title is ‘conquer the dark matter, volume 1’
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medrxiv.org/content/10.64898…
Jason Rothman retweeted
SecureBio Detection has a lot to share since our last update: several new preprints on our wastewater work, scaled up our nasal swab collection dramatically, we're moving into a larger lab space, and we've rebranded from the "Nucleic Acid Observatory" to "SecureBio Detection"
More details: securebio.org/blog/updates-m…
Jason Rothman retweeted
Happy to report that we submitted a new manuscript this week.
The manuscript is abour our work untargeting wastewater sequencing as a technique for monitoring viral pathogens from wastewater. @lennijusten
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medrxiv.org/cgi/content/shor…
Jason Rothman retweeted
Deep metatranscriptomic sequencing data of wastewater from Los Angeles, USA, 2023–2024 nature.com/articles/s41597-0…
Jason Rothman retweeted
Out Now! STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies bit.ly/48sSTIH #Microbiology #EnvironmentalScience #Microbiome
Jason Rothman retweeted
Out Now! A roadmap for equitable reuse of public microbiome data bit.ly/4nQ80Sq #Microbiome #DataSharing #EquitableAccess
Jason Rothman retweeted
We have an epic line-up for the SoCal Microbiome Symposium at CalTech on Sept 19th, Sarah Allard, Ariane Briegel, Nandita Garud, Sarakis Mazmanian, Joel Sachs, Julia Schartzman, Emily Stein and David Underhill. Thanks to hosts Margaret McFall Ngai and Ned Ruby!
Jason Rothman retweeted
I’m thrilled to announce the update of our water surveillance dashboard.
Many improvements, and our first substantial move into ‘OneHealth’.
Read to the end to find the Easter Egg.
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dholab.github.io/public_viz/…
Jason Rothman retweeted
This is so cool.
I’m pleased to share version 1.0 of our new dashboard for displaying data from our wastewater metagenomic project.
This is a collaborative projected between MU, U. Wisc @dho, and SecureBio; funded by Inkfish and Open Philanthropy.
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lungfish-science.github.io/w…
Jason Rothman retweeted
It took me SEVEN years to figure out that you can save a ggplot as a vectorized .svg file ggsave("file.svg"). The svg file can be opened on powerpoint and it will be completely vectorized, even text are still recognized as text boxes! No more recreating plots on illustrator!!!!!
Officially published in npj Metabolic Health and Disease! We ran metabolomics and salivary biomeasures + metals on saliva from >700 children and their caregivers as part of the Family Life Project.
nature.com/articles/s44324-0….
@KatrineWhiteson @UCIBioSci @UCRCNAS @uci_iisbr
Jason Rothman retweeted
HEADS UP: Here’s our list of #ESA2024 microbe-related talks & posters we think you’ll like! 🦠🦠🦠🦠🦠🦠🦠🦠🦠🦠
docs.google.com/spreadsheets…
Happy to announce: This August, I'll be joining @UCRiverside as an Assistant Teaching Professor in the Dept. of Microbiology & Plant Pathology! Excited for teaching and to study pedagogy and microbial ecology!
Jason Rothman retweeted
Join us for the 10th (!) SoCal Microbiome Symposium on Friday Sept 20, 2024! @MicrobiomeUcr @AmiBhattMD @PJorth @JasonArothman @ZBioticsCompany @justinrmeyer @smruthi_karthik @sydneyglassman @Matt_E_Griffin microbiome.uci.edu/event/10t…
Jason Rothman retweeted
Prof. Katrine Whiteson @KatrineWhiteson's fiber and microbiome research highlighted this week @UCIrvine news.uci.edu/2024/05/31/a-li…
Want to see what 1,425 human metabolomes looks like? Our latest preprint is out! We ran LCMS metabolomics on saliva from children and their caregivers as part of the Family Life Project.
biorxiv.org/content/10.1101/…
@KatrineWhiteson @UCIBioSci @uci_iisbr @UCI_Microbiome
