Scientific programmer (she/her) at the ANU Likes: open source science, bikes, long walks in the bush 👾 Huttley Lab
Joined July 2021
- Tweets23
- Following73
- Followers35
- Likes53
Katherine Caley retweeted
🚀 Our latest tool, GraphBin-Tk, is now published in JOSS. GraphBin-Tk is an assembly graph-based binning toolkit containing all the tools and functionality you need to bin metagenomes.
#Bioinformatics #Metagenomics #Binning #Software
joss.theoj.org/papers/10.211…
Katherine Caley retweeted
Can we democratize #PrecisionOncology through accurate response prediction based solely on tumor H&E images🔬??
Our ENLIGHT-DeepPT framework can help make it happen! We are ecstatic to share our latest work in #DigitalPathology, just out in @NatureCancer! rdcu.be/dMB0u
Katherine Caley retweeted
RSB Director's Seminar, Dr Cheng Soon Ong, Associate Science Director, Data61, @CSIRO. Opportunities and Challenges in Machine Learning for Genomics. Wednesday 22 May 12.30, Eucalyptus Seminar Room or via Zoom Webinar.
biology.anu.edu.au/news-even…
cogent3 has a brand new logo, designed by Yours Truly. This is most important in allowing us to achieve a universal marker of Science Software Success: laptop stickers!!
Katherine Caley retweeted
Have you seen our new bacteriophage recovery tool, Phables? 😃🦠 Phables recovers > 49% more high-quality phage genomes, including variant genomes with > 99% ANI, compared to existing viral identification tools.
#Bioinformatics #phages #bacteriophages
academic.oup.com/bioinformat…
Katherine Caley retweeted
I think we need to talk about how devastating this cancer microbiome refutation paper from
@StevenSalzberg1
and colleagues is. It really speaks to how devoid of critical thinking and intellectual depth our glam publishing ecosystem has become. 1/n
biorxiv.org/content/10.1101/…
I'm actually thinking my first publication will be an analysis of where all the workplace kitchen forks go... working title is "For Fork's Sake". Collaborators welcomed! Forks also welcomed
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Katherine Caley retweeted
Jonas Salk, inventor of polio vaccine: "There is no patent. Could you patent the sun?"
Frederick Banting, inventor of insulin: "Insulin does not belong to me. It belongs to the world."
Moderna CEO Stéphane Bancel: 400% price hike on COVID vaccine is "consistent with the value."
following up the theoretical phylogenetics conference (@phylomania) with flowers on kunanyi. and furry echidna! after so much maths this was very nice 😊
breaking bread with my biggest competition
Celebrated the best and runner-up Phylomania student talks by Salamanca Markets. Congrats again🥇@KatherineeCaley and all the other speakers for amazing and insightful talks! Go #teamANU @EcoEvo_ANU
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Super chuffed to be a part of this project, it’s epic and exciting and something you should check out 🤗
Can we provide precision oncology to cancer patients without high-cost sequencing just by using their tumor H&E images🔬?
We are excited to present the first framework for sequencing-less transcriptome-based precision oncology.⚡️ biorxiv.org/content/10.1101/…
Thanks for having me @combine_au! ✨see you next time 👀
Fabulous talk from @KatherineeCaley about mutation disequilibrium at #COMBINE21. Such high-quality work is being presented by students of all levels today 💪
Takes me back to my first @combine_au talk in 2019 as an honours student.
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Congratulations @le_anh_phuong 🥳 a very impressive and honourably mentioned talk at #COMBINE21 😇
Congratulations to all of our prize winners for best talk, best flash talk and people's choice awards!
Hats off to a truly great #COMBINE21 Symposium and to all of the amazing #Bioinformatics research being done in Australia 🙌
