Mingbo retweeted
PHLOWER infers complex cell differentiation trajectories from single-cell multimodal data.
nature.com/articles/s41592-0…
Mingbo retweeted
And read the News & Views highlighting this work, here:
nature.com/articles/s41592-0…
Mingbo retweeted
Our new paper in @naturemethods led by @vanvanka123 @MingboCheng Jitske Jansen with @KuppeChristoph nature.com/articles/s41592-0…
Mingbo retweeted
Thrilled to share PHLOWER, which uses Hodge Laplacians to build trajectory-level embedding for inferring complex cellular differentiation trees from multimodal (RNA+ATAC) single-cell data. By @MingboCheng @jansen_jitske with @rkramann @KuppeChristoph tinyurl.com/3csvtwne 1/7
Mingbo retweeted
With Bella Banjanin and Yevin Mun, it’s my pleasure to present our last hunting story. Using our joint expertise from the @vanvanka123 , @rschneiderlab , and Nombela-Arrieta Lab, we tried to find another missing piece of the complex bone marrow fibrosis puzzle.
Mingbo retweeted
Thrilled to share PHLOWER, which uses Hodge Laplacians to build trajectory-level embedding for inferring complex cellular differentiation trees from multimodal (RNA+ATAC) single-cell data by @MingboCheng @jansen_jitske with @rkramann @KuppeChristoph tinyurl.com/yvu48j6k 1/7
Mingbo retweeted
📢Join SCOG Virtual Lecture #50 (Zoom)
⏰ December 16, 9:30-10:15am CET
💬Fabian Theis (@fabian_theis, @HelmholtzMunich, @CompHealthMuc)
💡 "*ingle *ells, *ingle *ells: my letter to Santa on what single cell can bring next year"
✏️ Registration: bit.ly/scogvls
#SCOGVLS
Mingbo retweeted
Dissecting the molecular function of a particular gene is complex and laborious work 🧬🧫🔬
Find out @iScience_CP 👀 doi.org/10.1016/j.isci.2022.… how you can use the variation in multi-layered datasets from human cohorts to infer phenotypic relevance for your gene of interest.
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Mingbo retweeted
"MOJITOO: a fast and universal method for integration of multimodal single-cell data" is published in ISMB proceedings (tinyurl.com/47vpmdc2) with extended benchmarking and an comprehensive website costalab.github.io/MOJITOO/. Check the talk by @MingboCheng at @ISCB_RegSys!
Mingbo retweeted
Do you have multiome single cell data and is looking for a method to detect a common latent space? MOJITOO uses canonical correlation analysis for fast and parameter free estimation of a latent space tinyurl.com/4w63bpen tinyurl.com/27tveybc @MingboCheng @ZhijianLi3 (1/3)
