Colin Reardon (@ReardonColin) header
Colin Reardon (@ReardonColin) profile picture

Colin Reardon

@ReardonColin

Studying how bugs talk to nerves, nerves talk to immune cells. not all at the same time. Can still do my own microscopy. 3D printing nerd.

 Davis
reardonlab.com
Joined May 2013
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  • Followers199
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Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)Photo by Colin Reardon (@ReardonColin)
We're still hiring. Looking for one more postdoc to work on a funded project on neural regulation of lung inflammation. Project is huge spanning nerves, B-, T-cells, PMN. DM or email creardon(at)ucdavis.edu
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New publication to share:Inhibition of acute lung inflammation by a neuroimmune circuit induced by vagal nerve stimulation | Science Advances science.org/doi/10.1126/scia…
Inhibition of acute lung inflammation by a neuroimmune circuit induced by vagal nerve stimulation

Inhibition of acute lung inflammation by a neuroimmune circuit induced by vagal nerve stimulation

A lung anti-inflammatory pathway can be activated to block acute lung inflammation.

science.org
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Cofirst author grad students, input from @gareaulab, supported by @NIAIDNews @NIH and @cziscience
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Interested in neuroimmune interactions in the intestine? Our new manuscript describing how Substance P receptor signaling can alter the host response to Citrobacter rodentium is now out in PNAS. pnas.org/doi/10.1073/pnas.24…
Substance P receptor signaling contributes to host maladaptive responses during enteric bacterial...

Substance P receptor signaling contributes to host maladaptive responses during enteric bacterial...

Immune responses in the intestine are intricately balanced to prevent pathogen entry without inducing immunopathology. The nervous system is well e...

pnas.org
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Opto2P-FCM: A MEMS based miniature two-photon microscope with two-photon patterned optogenetic stimulation biorxiv.org/cgi/content/shor… #biorxiv_neursci
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To all those who celebrate, Happy "1% away from funded last round to ND" day!
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Great conference dinner celebrating many years of ISAN meetings!
Image from ISANautonomic (@ISANautonomic)
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Check out our podcast on our latest collaborative research project 🥳🥳 @MariaLMarco @cristinatorfue @_GloryB @matteopusceddu_ @ucdavisvetmed @UCD_APC
AJP-Gastrointestinal and Liver Physiology (@ajpgi) profile pictureAJP-Gastrointestinal and Liver Physiology@ajpgi24 May 2024
🎧to our latest podcast as Mélanie Gareau(@gareaulab)& Maria Marco delve into their latest research "Milk & Lacticaseibacillus paracasei BL23 effects on intestinal responses in a murine model of #colitis." ow.ly/vfin50RU6mW #FermentedMilk #probiotics #IntestinalInflammation
Image from AJP-Gastrointestinal and Liver Physiology (@ajpgi)
Image from AJP-Gastrointestinal and Liver Physiology (@ajpgi)
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The app is available on GitHub where you are free to give it a try! sucrelab.org/alveoleye The entire source code is available and we welcome feedback on this new project. 5/5
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my cybersecurity training is expired. many panicky emails insisting I need to click the included link. Isn't that test enough?
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Replying to @ReardonColin
@ReardonColin lab PhD candidate @Emmy_Tay_ giving her lightening talk at #APS2024 on neuroimmune responses to infection in the Forte symposium 🥳 @UCD_APC @ucdavisvetmed
Image from Dr. Melanie Gareau (@gareaulab)
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Colin Reardon retweeted
Lior Pachter (@lpachter) profile picture
Lior Pachter@lpachter5 Apr 2024
The choice of whether to use Seurat or Scanpy for single-cell RNA-seq analysis typically comes down to a preference of R vs. Python. But do they produce the same results? In biorxiv.org/content/10.1101/… w/ @Josephmrich et al. we take a close look. The results are 👀 1/🧵
Image from Lior Pachter (@lpachter)
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Colin Reardon retweeted
Rajan Singh (@Rajan___Singh) profile picture
Rajan Singh
@Rajan___Singh23 Mar 2024
#Neuroimmune Crosstalk in the #Gut: Impact on #Local, #Autonomic & #GutBrain Function‼️ @AGA_Gastro🆕🔥 🚨Excellent summary @NIDDKgov @NIH workshop👏 ✳️So much to learn in the field!😇 ▶️#ENS Development & #Immune Interactions ✨ ▶️Mechanisms of #Neuroimmune #Communication🌟 ▶️Neuroimmune #Interactions & #GutSensation☀️ ▶️Neuroimmune Interactions along #GutBrainAxis⚡️ 📢#Gaps in knowledge #Outstanding questions & #Future directions🔥 #DGBIs #GutHelath #MicrobiotaGutBrainAxis #GutBarriers #GutMicrobiota 👉gastrojournal.org/article/S0… @AmerGastroAssn @ANMSociety @esnm_eu @GutBrainScience #GITwitter #MedTwitter #ScienceTwitter
Image from Rajan Singh (@Rajan___Singh)
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Interested in microglia analysis from light microscopy data, but think the standard ways of segmentation are missing things? Online now is our manuscript where we created a new tool called PrestoCell at PlosONE journals.plos.org/plosone/ar…
PrestoCell (right) segments microglia that are physically close as separate cells that 3dMorph incorrectly clusters as a single cell (left)

ALT PrestoCell (right) segments microglia that are physically close as separate cells that 3dMorph incorrectly clusters as a single cell (left)

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In this manuscript we also show it works on some pretty large volumes (yes volumes) from light sheet data. So it’s open source, cross platform, and free. This collaboration between @UCD_APC in @ucdavisvetmed, Math, and Computer Science @ucdavis
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We tested it on a few other non-microglial cell types too… If you give it a try and it doesn’t work we’d love to know, if you love it that would be great to hear too!
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👉This research provides a foundation for other studies evaluating how agricultural dusts disrupts host physiology and promotes debilitating gastrointestinal and systemic disorders. 🖱ow.ly/pELq50QzAAk @DecMcCole @DrMeiCrawf @tmnordgren #AgriculturalPollution #GutLungAxis
Image from AJP-Gastrointestinal and Liver Physiology (@ajpgi)
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#Cellpose 3! Not all images are perfect. Restore your images with Cellpose3 to get better segmentations, w/ @marius10p biorxiv.org/content/10.1101/…
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Now hiring! Optical Imaging Technician - Tech Job Family, Phase 2. @SnyderInstitute @UCalgaryMedinvites applications. This Full-time Fixed Term role is for approx. 1 yr (based on length of grant funding), w/ possibility of extension. Apply by Jan. 30! bit.ly/48MuexM
Image from Snyder Institute for Chronic Diseases (@SnyderInstitute)
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