Kurt Schmoller retweeted
Finally, through collaborations, we show that the reporter works in budding yeast (with Francesco Padovani @frank_pado in Kurt Schmoller's lab @SchmollerLab) and in Drosophila (Mashiat again, with help from Abhi Sharma in Savraj Grewal's lab @SavrajGrewal).
Kurt Schmoller retweeted
It really does work amazingly!
mt-Kaede-HI-NESS @MitoMORPH is such an amazing reporter for mitochondrial DNA, and it works beautifully in budding yeast too! Check out the updated preprint to learn more:
doi.org/10.1101/2023.10.23.5…
@frank_pado @AlissaFinster
mt-Kaede-HI-NESS @MitoMORPH is such an amazing reporter for mitochondrial DNA, and it works beautifully in budding yeast too! Check out the updated preprint to learn more:
doi.org/10.1101/2023.10.23.5…
@frank_pado @AlissaFinster
I want to follow up on our recent preprint introducing a new genetic fluorescent mtDNA nucleoid reporter. biorxiv.org/content/10.1101/…
Kurt Schmoller retweeted
🚨 New segmentation model alert! 🚨🥳
You can finally use InstanSeg in our #BioImageAnalysis software #CellACDC!
InstanSeg is a fast and multi-channel cell segmentation model by @petebankhead, Thibaut Goldsborough, & co. The multi-channel ability is very interesting!
Kurt Schmoller retweeted
Our preprint list is now up on FocalPlane. This week we focus on research in #bioimageanalysis. Drop us a message if we’re missing any preprints that you’ve been reading or writing!
focalplane.biologists.com/20…
Kurt Schmoller retweeted
Best end to the incredible PhD journey! So proud, and grateful to everyone involved along the way!
Cover & highlight #22 by @osman_lab
N&V on senescence/p21 & the path to fibrosis
Commentary on PIWI & RNAs
and…
CEP192 localises mitotic Aurora-A activity
DELE1 maintains muscle proteostasis
Carboxy-terminal polyglutamylation regulates Dishevelled LLPS
…
embopress.org/toc/14602075/4…
Kurt Schmoller retweeted
Seeing mitochondrial network on a lot of yeast cells on the cover of a prestigious journal makes me very happy 😎
Cover & highlight #22 by @osman_lab
N&V on senescence/p21 & the path to fibrosis
Commentary on PIWI & RNAs
and…
CEP192 localises mitotic Aurora-A activity
DELE1 maintains muscle proteostasis
Carboxy-terminal polyglutamylation regulates Dishevelled LLPS
…
embopress.org/toc/14602075/4…
Kurt Schmoller retweeted
Cell size matters, and it's a major regulator of cell function. @SchmollerLab reviews size control strategies of eukaryotic cells & the intricate link of cell size to intracellular biomolecular scaling, organelle homeostasis, cell cycle progression. 🔬ow.ly/k5Sa50U9ZQx
Kurt Schmoller retweeted
The boss in action at the 6th Munich Yeast Meeting!✨️ Thanks to @SchmollerLab and @HamperlLab for organising such a great meeting!
#Yeast #Mitochondria – at Munich, Bavaria
To leverage the breathtaking progress of AI approaches for experimental biology, we need to bridge the gap between conceptual method development and application in real-life image analysis. We are happy to now be part of the great @bioimageio initiative with SpotMAX @frank_pado
🚀🎉SpotMAX is now a proud community partner of @bioimageio, the model zoo where you can find awesome pre-trained segmentation models! PS: You won't get the fireworks on the BioImage.IO website but feel free to request them on the SpotMAX GUI 😎
Kurt Schmoller retweeted
While you could already use BioImage IO models in SpotMAX, by becoming a partner we commit to contribute with our pre-trained models, tutorials, etc. If you don't know what #SpotMAX is you can catch up on my previous Twitter thread here xitter.cf/frank_pado/status/1849…
SpotMAX, our software tool for analysing multi-dimensional microscopy data, is finally out! 🎉 And conveniently, I just presented it at the #I2K conference 😀
A multi-year-long effort of many great collaborators and users. But what can SpotMAX do? A small thread
Kurt Schmoller retweeted
SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification
Francesco Padovani et al
doi: doi.org/10.1101/2024.10.22.6…
Kurt Schmoller retweeted
I am very happy to announce that I will be joining @HelmholtzMunich as a group leader from January 2025. Looking very much forward to work with my new colleagues on Ferroptosis and mitochondria #ERCStg @ERC_Research @Conrad_Lab Fabiana Perocchi @SchmollerLab @NatalieKrahmer
Kurt Schmoller retweeted
🎉One of our successful #epigenetics postdocs, @ATvardovskiy, is opening his own lab at @Penn!
🚨And he IS HIRING!
Visit his lab website @PennEpiInst: tvardovskiylab.org
& stay tuned for upcoming #academicpositions at all levels.
Congratulations & best of luck, Andrey!
📢 JOB ALERT: Tvardovskiy Lab at @PennEpiInst is hiring at all levels! Interested in chromatin biology, quantitative proteomics, or epigenetic modifications? Learn more about our research and apply at tvardovskiylab.org Please RT
Kurt Schmoller retweeted
📢 JOB ALERT: Tvardovskiy Lab at @PennEpiInst is hiring at all levels! Interested in chromatin biology, quantitative proteomics, or epigenetic modifications? Learn more about our research and apply at tvardovskiylab.org Please RT
Kurt Schmoller retweeted
SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification biorxiv.org/cgi/content/shor… #biorxiv_cellbio
Kurt Schmoller retweeted
Oh, wow!Another #PrePrintAlert!
Congratulations to @frank_pado, his supervisor @SchmollerLab & col. from IFE at Epigenetics @HelmholtzMunich!!
A great #researchtool is now freely available to quantify spots from your #microscope #imaging.
Read the fantastic 🧵from 1st author
You want to analyze your cells and need to quantify spots? But you don't want to develop your own pipeline from scratch or click on spots manually? @frank_pado and #spotmax have you covered!
doi.org/10.1101/2024.10.22.6…
You want to analyze your cells and need to quantify spots? But you don't want to develop your own pipeline from scratch or click on spots manually? @frank_pado and #spotmax have you covered!
doi.org/10.1101/2024.10.22.6…
SpotMAX, our software tool for analysing multi-dimensional microscopy data, is finally out! 🎉 And conveniently, I just presented it at the #I2K conference 😀
A multi-year-long effort of many great collaborators and users. But what can SpotMAX do? A small thread
Congratulations @frank_pado! And huge thank you to our fantastic collaborators and the whole #spotmax team! @LabKoehler @daph_cabi @JetteLeng @xiaofengsu @NadaAlRefaie1 @YagyaChadha
Kurt Schmoller retweeted
If you use SpotMAX, do not hesitate to contact us for any issues, questions, or feedback you might have!
GitHub: github.com/SchmollerLab/Spot…
Documentation: spotmax.readthedocs.io/en/la…
Preprint: shorturl.at/EQHJA
Ground-truth dataset: shorturl.at/e6r3R
