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Yale BioImage Suite

@SuiteYale

A simple, modern, & powerful bioimaging software suite—on the web

bioimagesuiteweb.github.io/webapp/
Joined September 2018
  • Tweets152
  • Following97
  • Followers149
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Photo by Yale BioImage Suite (@SuiteYale)Photo by Yale BioImage Suite (@SuiteYale)Photo by Yale BioImage Suite (@SuiteYale)
Yale BioImage Suite retweeted
Dustin Scheinost (@DScheinost) profile picture
Dustin Scheinost@DScheinost21 Oct 2024
Can neuroimaging predictive models survive across diverse real-world data?🧠🌎We put models to the test across 3 large-scale unharmonized datasets with over 2,800 participants. See our new work in this special issue of Developmental Cognitive Neuroscience: sciencedirect.com/science/ar…
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Yale University (@Yale) profile picture
Yale University
@Yale28 Mar 2024
Algorithms that could help neuroscientists better understand human behavior are trained and tested on separate datasets to ensure accuracy. A new Yale study assesses how data “leaks” from one set to another undermine model performance. @YaleMed #Yale news.yale.edu/2024/02/28/dat…
Data ‘leaks’ can sink machine learning models

Data ‘leaks’ can sink machine learning models

Machine learning models should be trained and tested on separate data. A new study assesses the effect on model performance when this boundary is blurred.

news.yale.edu
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Yale BioImage Suite retweeted
Matt Rosenblatt (@RosenblattMatt) profile picture
Matt Rosenblatt@RosenblattMatt5 Mar 2024
Excited to share that our paper "Data leakage inflates prediction performance in connectome-based machine learning models" is now out in @NatureComms nature.com/articles/s41467-0… (with @LinkTejavibulya, @925452096Andy, @sNeuroble, and @DScheinost )
Data leakage inflates prediction performance in connectome-based machine learning models

Data leakage inflates prediction performance in connectome-based machine learning models

Nature Communications - The effects of data leakage on predictive models in neuroimaging studies are not well understood. Here, the authors show that data leakage via feature selection and repeated...

nature.com
Matt Rosenblatt (@RosenblattMatt) profile pictureMatt Rosenblatt@RosenblattMatt12 Jun 2023
Ever wondered how data leakage can affect neuroimaging (specifically functional/structural connectivity) predictive models? Check out our new preprint⬇️ biorxiv.org/content/10.1101/…
The effects of data leakage on neuroimaging predictive models

The effects of data leakage on neuroimaging predictive models

Predictive modeling has now become a central technique in neuroimaging to identify complex brain-behavior relationships and test their generalizability to unseen data. However, data leakage, which...

biorxiv.org
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Associations between greater grip strength, brain structure, and mental health👇🏼 ⤴️ brain grey matter volume ⤴️ cognitive functioning ⤴️ life satisfaction ⤴️ subjective well-being ⤵️ depression & anxiety symptoms #grip #brain #mentalhealth #strength bmcmedicine.biomedcentral.co…
Image from Prof Omid Khaiyat M.D., PhD (@Omid_HopeUni)
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Yale BioImage Suite retweeted
Huili Sun (@huili_sun) profile picture
Huili Sun@huili_sun20 Sep 2023
I'm thrilled to share that our work from @DScheinost's lab is out on @NatureComms! nature.com/articles/s41467-0…
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I'm thrilled to share our new paper on #eatingdisorders out now in @NatMentHealth! nature.com/articles/s44220-0… 'Assessing a multivariate model of brain-mediated genetic influences on disordered eating in the ABCD cohort' 🧬🧠📉 Here's a brief 🧵
Image from Maggie Westwater, PhD (@maggieeastfire)
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Yale BioImage Suite retweeted
DaPBE (@ApBE_) profile picture
DaPBE@ApBE_28 Jun 2023
Asociaciones de la fragilidad física con los resultados de salud y la estructura cerebral en 483 033 adultos de mediana edad y mayores: un estudio poblacional del Biobanco del Reino Unido thelancet.com/journals/landi…
Associations of physical frailty with health outcomes and brain structure in 483 033 middle-aged...

Associations of physical frailty with health outcomes and brain structure in 483 033 middle-aged...

Physical frailty is associated with diverse unfavourable health-related outcomes, which can be mediated by differences in brain structure. Our findings offer a framework for guiding preventative...

thelancet.com
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Grip strength is a highly underrated metric of health. pubmed.ncbi.nlm.nih.gov/3607….
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Yale BioImage Suite retweeted
Yale University (@Yale) profile picture
Yale University
@Yale10 Jul 2023
Maps of brain connectivity are built on brain atlases, of which there are many. A new tool allows researchers to compare maps built on different atlases. @YaleMed @YaleSEAS #Yale news.yale.edu/2023/07/05/yal…
Yale researchers encourage brain data reuse with CAROT

Yale researchers encourage brain data reuse with CAROT

Maps of brain connectivity are built on brain atlases, of which there are many. A new tool allows researchers to compare maps built on different atlases.

news.yale.edu
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Yale BioImage Suite retweeted
Rongtao Jiang (@RongtaoJiang) profile picture
Rongtao Jiang@RongtaoJiang17 Apr 2023
Curious about how frailty may be an indicator of other health outcomes? We present new work that suggests a link between frailty and >300 health-related outcomes, especially those relating to mental health, which may be mediated by brain structure. Now out in @LancetDigitalH
Image from Rongtao Jiang (@RongtaoJiang)
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Yale BioImage Suite retweeted
Yale University (@Yale) profile picture
Yale University
@Yale14 Jul 2023
This latest edition of Insights & Outcomes is coming at you with all the feels. Yale researchers study a biomarker for craving, a link between climate change and certain bacteria, and a neurological route for vicarious thrills. #Yale news.yale.edu/2023/07/06/ins…
Cravings, queasiness, and vicarious thrills

Cravings, queasiness, and vicarious thrills

Yale researchers study a biomarker for craving, a link between climate change and certain bacteria, and a neurological route for vicarious thrills.

news.yale.edu
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Yale BioImage Suite retweeted
Dustin Scheinost (@DScheinost) profile picture
Dustin Scheinost@DScheinost14 Jun 2023
A bit late in posting this … Now out (and on the cover!) of the June issue of AJP: “Transdiagnostic Connectome-Based Prediction of Craving“ Using task-based functional connectomes, we predicted self-reported cravings in 274 individuals with CPM. ajp.psychiatryonline.org/doi…
Transdiagnostic Connectome-Based Prediction of Craving | American Journal of Psychiatry

Transdiagnostic Connectome-Based Prediction of Craving | American Journal of Psychiatry

Objective:Craving is a central construct in the study of motivation and human behavior and is also a clinical symptom of substance and non-substance-related addictive disorders. Thus, craving...

psychiatryonline.org
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Yale BioImage Suite retweeted
Javid Dadashkarimi (@JDadashkarimi) profile picture
Javid Dadashkarimi@JDadashkarimi14 Jun 2023
In new work out in Medical Image Analysis, we present  CAROT: Cross Atlas Remapping via Optimal Transport. CAROT touches on some of the vibrant areas of functional MRI, predictive modeling, neuroimaging, & connectomics including privacy & open science 1/16 sciencedirect.com/science/ar…
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Yale BioImage Suite retweeted
Matt Rosenblatt (@RosenblattMatt) profile picture
Matt Rosenblatt@RosenblattMatt12 Jun 2023
Ever wondered how data leakage can affect neuroimaging (specifically functional/structural connectivity) predictive models? Check out our new preprint⬇️ biorxiv.org/content/10.1101/…
The effects of data leakage on neuroimaging predictive models

The effects of data leakage on neuroimaging predictive models

Predictive modeling has now become a central technique in neuroimaging to identify complex brain-behavior relationships and test their generalizability to unseen data. However, data leakage, which...

biorxiv.org
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Yale BioImage Suite retweeted
Fumiko Hoeft MD PhD (@FumikoHoeft) profile picture
Fumiko Hoeft MD PhD@FumikoHoeft28 May 2023
What are your favorite papers on Predictive modeling, Neuroimaging, Deep learning, Data science and Computational psychiatry / cognitive neuroscience? I add 9 of mine here. Yours?👇👇👇
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Yale BioImage Suite retweeted
Fumiko Hoeft MD PhD (@FumikoHoeft) profile picture
Fumiko Hoeft MD PhD@FumikoHoeft28 May 2023
Predicting the future of neuroimaging predictive models in mental health Tejavibulya, Rolison, Gao, Liang, Peterson, Dadashkarimi, Farruggia, Hahn, Noble, Lichenstein, Pollatou, Dufford & Scheinost @molpsychiatry volume 27, pages 3129–3137 (2022) nature.com/articles/s41380-0…
Predicting the future of neuroimaging predictive models in mental health

Predicting the future of neuroimaging predictive models in mental health

Molecular Psychiatry - Predicting the future of neuroimaging predictive models in mental health

nature.com
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Yale BioImage Suite retweeted
Matt Rosenblatt (@RosenblattMatt) profile picture
Matt Rosenblatt@RosenblattMatt16 May 2023
Use machine learning in🧠research or for other high-dimensional data? Curious about its robustness to data manipulations ("trustworthiness")? Check out our new article in @Patterns_CP and thread ⬇️ cell.com/patterns/fulltext/S…
Connectome-based machine learning models are vulnerable to subtle data manipulations

Connectome-based machine learning models are vulnerable to subtle data manipulations

Imperceptible data manipulations can drastically increase or decrease performance in machine learning models that use high-dimensional neuroimaging data. These manipulations could achieve nearly any...

cell.com
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Yale BioImage Suite retweeted
Dustin Scheinost (@DScheinost) profile picture
Dustin Scheinost@DScheinost8 May 2023
Hey, fetal, infant, & toddler (FIT) neuroimagers Come to our symposium if you’re at or around Yale on May 17. We will showcase exciting current FIT neuroimaging work at @Yale.
Image from Dustin Scheinost (@DScheinost)
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Yale BioImage Suite retweeted
CLaE (@leafs_s) profile picture
CLaE
@leafs_s9 May 2023
Trends in Neurosciences Why is everyone talking about brain state? cell.com/trends/neuroscience…
Why is everyone talking about brain state?

Why is everyone talking about brain state?

The brain is a dynamic organ that continuously adapts in response to a changing world. Recent technical advances in recording methods and computational analysis have created an opportunity to better...

cell.com
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Yale BioImage Suite retweeted
Ross Perry (@oliverrossperry) profile picture
Ross Perry@oliverrossperry27 Apr 2023
More than half of seniors are frail or getting frail. Poor oral health is bidirectional with frailty. We are testing #Prevora's abilities to help the frail in a randomized controlled study. Stay tuned. thelancet.com/journals/landi…

Associations of physical frailty with health outcomes and brain structure in 483 033 middle-aged...

Physical frailty is associated with diverse unfavourable health-related outcomes, which can be mediated by differences in brain structure. Our findings offer a framework for guiding preventative...

thelancet.com
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