Genomes, diving and cycling. All views are my own and not those of my employer.
Joined December 2011
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Valerie Schneider retweeted
The first complete sequence of a human genome, known as T2T-CHM13, is now available! Finding the new assembly at NCBI is easy. More info here:
ow.ly/ahp750Jcpi4
Valerie Schneider retweeted
Join NCBI at #PAGXXIX in San Diego. Attend exciting NCBI events and provide input on the NIH Comparative Genomics Resource (#NCBICGR)! loom.ly/3jBQGZA
Valerie Schneider retweeted
“We're excited to be developing a new resource to help researchers in the area of comparative genomics.”
Join us at #PAGXXIX to learn more! #NCBICGR loom.ly/5ZOPj0Q
Valerie Schneider retweeted
Join our CGR Listening Session to give input into how NCBI can best provide a resource to support your analyses. We want to hear from you! loom.ly/hYvu9Vc #NCBICGR
Valerie Schneider retweeted
Attending the GRC-moderated panel on GRCh38 and the pan-genome at the T2T/HPRC meeting next Tuesday? Can't make it, but still want to let the GRC know your thoughts? Either way, fill out this quick survey to weigh in! forms.gle/Ns328g4QwMF4kN7XA
Valerie Schneider retweeted
Announcing GRCm39, the next version of the mouse reference genome assembly! Learn more at our blog (genomeref.blogspot.com/2020/…) and download from GenBank (ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/635/GCA_000001635.9_GRCm39).
16 Ways to Support Your Favorite Dive Shop During These Unprecedented Times blog.padi.com/2020/04/20/16-…
Valerie Schneider retweeted
#NCBI #BLAST Tip: Learn about accession-based databases and what happened to the GI numbers ow.ly/GblA30qnPgK
Valerie Schneider retweeted
Read about the recalculation of NCBI prokaryotic reference and representative genome assemblies ncbiinsights.ncbi.nlm.nih.go…
Valerie Schneider retweeted
We can't repeat this enough. Researchers: If you want to help fight #COVID19 and understand the #SARSCoV2 genome and evolution, submit your raw (human decontaminated) data to a public repository so that all have free access to it.
I’ve come across Coronavirus sequence databases that do not allow redistribution. MY STRONG SUGGESTION: Stay away from these, and simply submit your data to @NCBI / GenBank | #OpenData #bioinformatics | bit.ly/2UwtF7p
Valerie Schneider retweeted
I’ve come across Coronavirus sequence databases that do not allow redistribution. MY STRONG SUGGESTION: Stay away from these, and simply submit your data to @NCBI / GenBank | #OpenData #bioinformatics | bit.ly/2UwtF7p
Valerie Schneider retweeted
See how #SRA #cloud sequences promise additional discoveries related to #COVID-19 #CloudComputing #Bioinformatics ncbiinsights.ncbi.nlm.nih.go…
Valerie Schneider retweeted
James Taylor died yesterday. Our dear @jxtx -> Galaxy began with you. We will make sure it continues. We have no words.
Valerie Schneider retweeted
Need genomic sequence and annotation data for a eukaryotic organism? Now you can easily gather that data from across NCBI with Datasets! ncbi.nlm.nih.gov/datasets/
Read more about the new resource on NCBI Insights and give it a try today. ncbiinsights.ncbi.nlm.nih.go…
Valerie Schneider retweeted
The protein family models used by PGAP are now available for download! You can search this collection of Hidden Markov models (HMM) against your favorite prokaryotic proteins to identify their function using hmmer. For more information see: ncbiinsights.ncbi.nlm.nih.go…
Interested in developing ways to mine SRA?
Apply to the NIH DATA Scholars program, where you can lead transformative NIH projects for architecting search across petabyte-Scale genomic Sequence Read Archive (SRA) data. Applications are due April 30, 2020.
datascience.nih.gov/data-sch…
Valerie Schneider retweeted
Telework day two and I've already had a conference call bingo 5 times....!
Valerie Schneider retweeted
All of the Sequence Read Archive (SRA) now live on two cloud platforms! ow.ly/r5KO50yuDdd
