@gabefoley

Bioinformatics Postdoc | Research focussed on reconstructing proteins from millions of years ago...

 Brisbane, Queensland
Joined December 2008
  • Tweets124
  • Following2.2K
  • Followers469
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Register for the next @abacbs national seminar is on October 26th (last one before our annual meeting in December) and hear from Prof Barabara Holland and Jacqueline Rehn Click here-> sahmri.zoom.us/meeting/regis… @abacbspostdocs @wessidepraxis
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gabefoley retweeted
ABACBS@abacbs16 Oct 2023
ATTENTION final call for early bird rego! Don't miss out on the chance to attend our @ABACBS conference at the discounted rate. Where else but #Brisbane to discuss the latest #bioinformatics & #compbio ideas with awesome colleagues & new friends?! Closing midnight tonight AEST.
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gabefoley retweeted
ABACBS@abacbs29 Sep 2023
Our abstract submission deadline ends tonight at 1 minute to midnight so please submit your abstracts today! A big thanks if you've already sent yours. It's shaping up to be a STELLAR @ABACBS conference with an amazing line-up of #bioinformatics @dorkyM 2023.abacbs.org/
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gabefoley retweeted
ABACBS@abacbs25 Sep 2023
We received > 200 abstracts already & for those who submitted, we thank and salute YOU! 🙏🥳❤️🤩🥰🏆👏Our decision to extend the deadline was to ensure we are providing the opportunity to capture as much diversity in in our research and our researchers as possible.
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ABACBS@abacbs15 Sep 2023
Our local organising committee have been working behind the scenes to ensure this year's @ABACBS conference runs as smoothly and brilliantly as possible! 2023.abacbs.org/organising-c… We thank them for their hard work and can't wait to see you all in sunny Brisbane 4-8 Dec! 🐨🏖️🥰🦘🇦🇺
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The SCMB #GenGen seminar series are back in full force. Join us this Friday in person at Building 76, Room 228.
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I’m excited to announce that we were awarded an #MRFF EMCR grant! An incredible team of EMCRs @UQ_SCMB developing broad spectrum vaccines for emerging RNA viruses. @Ari1saacs @ChrisLDMcMillan @RhysHParry @cusycon @gabefoley Jessica Harrison & Yu Shang Low.
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Pore forming toxins are beautiful! If you think so too, our lab currently has a fully funded PhD position open. Applicants (domestic and international both welcome!) should be ready to commence by July 2023. More information in the link: graduate-school.uq.edu.au/pr…
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gabefoley retweeted
COMBINE@combine_au13 Feb 2023
Students at all levels are invited to join the 2023 COMBINE Symposium Organising Committee. The 2023 symposium will take place in Nov-Dec in Brisbane☀️ 👉Apply here: docs.google.com/forms/d/103Q… Applications close on Fri 24th Feb.

2023 COMBINE Symposium Committee EOI

Thank you for your interest in joining the 2023 COMBINE Symposium committee. Please complete this form by Fri 24th February. We will be in touch shortly thereafter. The 2023 COMBINE computational...

docs.google.com
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Back on the advent calendar of inspirational people and things after a bit of a weekend break, so three people today, all of whom have delivered an @ml4proteins talk that has set my mind racing with possibilities!
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Dragonfly spotted in the #ABACBS22 AGM assures me that it is actually a full member with voting rights.
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Replying to @bluebirdi
@bluebirdi has started Women in Bioinformatics Australia! Follow @bioinfowomen #abacbs22
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Replying to @givanna90
@Givanna90 kicks off the first of several postdoc talks at #ABACBS22 #ABACBS2022. Here is a short bio about Givanna. #abacbspostdocs #Supercells #Spectre
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Replying to @Feargal_Ryan
@Feargal_Ryan dives deep into immunology at #abacbs22. Check out his profile below! #COVID19 #systemsimmunology
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We are having the first national postdoc @abacbspostdocs meetup during @abacbs at The Wharf Hotel after the poster sessions (~7:40pm Tuesday 29/11). Come and join us to chat. RSVP here forms.gle/H8HnMgH6naXkbsVR7
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In this new Methods paper, Foley et al describe a method with capacity to perform ancestor sequence reconstruction from data sets in excess of 10,000 sequences. Check it out here: plos.io/3WjYzhh
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Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP) work from SCMB EMCR member @gabefoley published in @PLOSCompBiol journals.plos.org/ploscompbi…
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After much development, I'm happy to announce PhyloDM #bioinformatics #rust4bio. A #python and #rustlang package that converts a tree into a pairwise distance matrix. It uses ~94% less memory than DendroPy and is ~183x faster! github.com/aaronmussig/Phylo…

GitHub - aaronmussig/PhyloDM: Efficient calculation of phylogenetic distance matrices.

Efficient calculation of phylogenetic distance matrices. - aaronmussig/PhyloDM

github.com
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Excited to announce our next set of speakers! Aug 2nd — @namrata_anand2 on equivariant diffusion to generate sequence and structure Aug 16 — @JustasDauparas on str -> seq using ProteinMPN Sep 6 — @brianltrippe and Jason Yim on diffusion models of protein backbones
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We are looking for 1-2 enthusiastic co-organizers, ideally PhD students. [email protected] or DM if you're interested!
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