Adding the missing lipids to membrane protein structures using MD simulations. Developed by @tnewport and maintained by @pstansfeld.
Biochemistry,Oxford University
Joined April 2015
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MemProtMD retweeted
🎉We're delighted that @PDBeurope (@emblebi) is now part of the @mddbEU project, tackling the issue of storing and sharing data from molecular dynamics simulations, with fantastic collaborators such as @IRBBarcelona, @BSC_CNS, KTH, @UniofOxford, @HelloNostrum & @EPFL_en
MemProtMD retweeted
MD data standards, formats and interoperability under discussion today at @UniofOxford with MD code developers and experts #mddbEU #moleculardynamicssimulation
MemProtMD retweeted
thanks to the @pstansfeld lab workflow @memprotmd and using recent structures from AF we were able to analyse the residues in contact of our model membrane for 729 proteins from Mtb and compared with 1229 proteins from E coli:
MemProtMD retweeted
our collaborative paper with @pstansfeld & @CharmmGui labs is out in @PNASNews! Excellent work from @chelseabrowncg and @RobinCorey1 and all the co-authors with experiments from M Gilleron & @NigouJ @IpbsToulouse and @loquet_lab @iecb_bordeaux new res from biorxiv version 🧵👇
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MemProtMD retweeted
When we say we love membrane proteins, we really mean it ❤️ Look at this cutie from MemProtMD, a database of intrinsic membrane proteins inserted into simulated lipid bilayers using Coarse-Grained Self Assembly Molecular Dynamics simulations. 3dproteinimaging.com/protein…
Just added to MemProtMD - simulation of new structure 7jpl - memprotmd.bioch.ox.ac.uk/_re…
6s7v - Lipoteichoic acids flippase LtaA, just finished simulating memprotmd.bioch.ox.ac.uk/_re…
