@ricklizz
 Rockville, MD
Joined July 2009
  • Tweets31
  • Following84
  • Followers22
Rick Z Li retweeted
BMC
@BioMedCentral1 Sep 2024
An article published in #BMCBioInformatics presents TIANA: an effective interpretation-oriented deep learning tool to infer hidden transcription factors cooperativities information embedded within nucleotides. bmcbioinformatics.biomedcent…

TIANA: transcription factors cooperativity inference analysis with neural attention

BMC Bioinformatics - Growing evidence suggests that distal regulatory elements are essential for cellular function and states. The sequences within these distal elements, especially motifs for...

link.springer.com
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When the PI is bored and goes around in the lab asking everybody how they're progressing xitter.cf/tannokasa3/status/1766…
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We are very excited to let you know that in early December, we will release the first trailer for the next Grand Theft Auto. We look forward to many more years of sharing these experiences with all of you. Thank you, Sam Houser
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New: Big Insurance Met Its Match When It Turned Down a Top Trial Lawyer’s Request for Cancer Treatment propublica.org/article/blue-…

Big Insurance Met Its Match When It Turned Down a Top Trial Lawyer’s Request for Cancer Treatment

Blue Cross and Blue Shield denied payment for the proton therapy Robert “Skeeter” Salim’s doctor ordered to fight his throat cancer. But he was no ordinary patient. He was a celebrated litigator. And...

propublica.org
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Med students should be banned from participating in research
Scientists Who Lift@ScientistsLift3 Nov 2023
What unpopular academia opinion would get you in this situation?
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Rick Z Li retweeted
dav@davfilmsx36 Mar 2021
Replying to @elonmusk
You are my hero, Elon.
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Rick Z Li retweeted
NBA
@NBA2 Oct 2023
Jimmy Butler takes the podium in style 😎 #NBAMediaDay
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So many fascinating ideas at yesterday's #blackboxNLP workshop at #emnlp2020. Too many bookmarked papers. Some takeaways: 1- There's more room to adopt input saliency methods in NLP. With Grad*input and Integrated Gradients being key gradient-based methods.
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Want to apply #deeplearning in your #regulatory #genomics analyses but overwhelmed by suite of interpretation tools? Check out ExplaiNN: interpretable and transparent neural networks for genomics with @NovakovskyG @ofornes @sara_mostafavi @WyWyWa 🧵👇 biorxiv.org/cgi/content/shor…
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It’s a cat. It’s a lawyer. It’s a combination cat-lawyer. nyti.ms/3aTanAf

‘I’m Not a Cat,’ Says Lawyer Having Zoom Difficulties (Published 2021)

The video was immediately shared widely and brought joy to many. The lawyer, Rod Ponton, said he was happy people got a much-needed laugh.

nytimes.com
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BREAKING: President Biden signs an executive order banning validation of RNA-seq results with Real-time PCR
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🤯 Did you know you could reference blocks of code in an .R file from RMD by referencing them by name??@thomas_mock talk (slides at bit.ly/marvelRMD) is full of great RMarkdown tips - check it out! #rstatsnyc
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For junior faculty members, reviewing manuscripts for journals you want to publish in can be an excellent opportunity to create positive relationships with editors & help publish future papers. As part of the #CRIHack series @SJMorrison_ shares the best way to review manuscripts.
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Out today! The TooManyCells approach to scRNA-seq data facilitates efficient and unbiased identification and visualization of cell clades and rare subpopulations. nature.com/articles/s41592-0…
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PIANO: A Fast Parallel Iterative Algorithm for Multinomial and Sparse Multinomial Logistic Regression dlvr.it/RQcghD
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Our review on #DeepLearning for Genomics is finally out - lot's of paper-digging led by @gokcen and @avsecz from @gagneurlab. Targeted at biologists who want to learn how 'AI' can be used for genomic modeling, from motif discovery to single cell genomics. nature.com/articles/s41576-0…
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Tumor Phylogeny Topology Inference via Deep Learning dlvr.it/RPgDw1
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Here is a growing list of conferences for 2020: generegulation.org/conferenc… Please reply to add new events* *Should be of general interest to gene regulation community
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Rick Z Li retweeted
Jimmie Ye@yimmieg26 Sep 2019
Great timing to announce our participation in sceQTL-gen: a consortium to share and meta-analyze genetic effects across immune cell types using scRNA-seq: eqtlgen.org/single-cell.html. This follows some lively discussions at the #ICDA about the need for more population-scale scRNA-seq
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Subpopulation identification for single-cell RNA-sequencing data using functional data analysis dlvr.it/RCzc1M
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