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Cancer genomics by day, drug discovery by night. Let’s integrate those datasets and solve cancer. he/him

Montréal, Québec
Joined May 2011
Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)Photo by Robinthebear (@softbear_)
Sometimes the microbe grows, sometimes the microbe sleeps. Why do you expect microbe to grow every time?Does microbe expect you to wake up at 6am every day? No! That's now how this works, buddy. The microbe can do what it wants, your OD readings be damned.
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Good news! We decided to start our own cryptocurrency. We will now pay all faculty salaries in our university currency, redeemable at the food court, bodega, and book store! Just wait until ucoin catches on!
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cancer biology via @xkcd
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How to be a resilient researcher ⁦@ErrantScience⁩
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Types of Scientific Paper xkcd.com/2456/ m.xkcd.com/2456/
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Excited to share XYZeq, a single-cell RNA-seq workflow that also resolves the spatial location of each cell: advances.sciencemag.org/cont…. XYZeq was jointly developed with @MarsonLab, Eric Chow and lead by an incredible team of trainees (Youjin Lee, Derek Bogdanoff, Yutong Wang).(1/n)
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If you want to make six figures overnight have you ever tried being a grad student???
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🎉🎉User friendly tools are the future of #singlecell analysis. GranatumX🍇can: -gets you reproducible results, no coding. -promote #bioinformatics tools with simple plug-in. Cloud server: garmiregroup.org/granatumx/a… Youtube: youtu.be/wi3DhDbXJYo. DOI: doi.org/10.1101/385591
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Interested in single cell genomics but need help getting started? Check out the full agenda for our Single Cell Genomics Day next Friday (3/26). All talks will be live-streamed (no registration required) at satijalab.org/scgd21/
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I can't believe I'm saying this this year, but I think this might be bigger than RNA vaccines. DeepMind can effectively predict protein structure with the fidelity of crystallography. sciencemag.org/news/2020/11/…
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updated book draft "computational #genomics with R" compgenomr.github.io/book/. Includes #Rstats ,#Chipseq, #MachineLearning, #Statistics, #multiomics, #BSseq and #rnaseq chapters.
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Extremely excited today to reveal the first of two great works (magnus opera?), just posted on bioarxiv, applying regulatory network analysis techniques to PDAC expression data to dissect the underlying biology of the disease. Tweetorial time! 1/ biorxiv.org/content/10.1101/…
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OUT NOW! I am absolutely delighted to share our "Single-Cell Tumor Immune Atlas for Precision Oncology". We present a #singlecell immune atlas: >500k cells, 217 patients,13 cancer types for 1) Patient stratification 2) Annotation 3) Spatial mapping. biorxiv.org/content/10.1101/…
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📣 Recordings of all keynote, regular, and lightning talks from R/Medicine 2020 are up on YouTube! 📣 youtube.com/playlist?list=PL… #rstats #rmedicine #rmed2020
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How discovery (and the retrospective telling of discovery) works.
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