Brain plasticity research with a metabolic twist. Our lab is based in Cologne, Germany (@CECAD_).

Cologne, Germany
Joined October 2021
Bergami Lab retweeted
The Sahay Lab is seeking a talented postdoctoral scientist to leverage exciting preliminary data and investigate lipid signaling mechanisms regulating cognition and healthspan. Please repost. Thank you. The Ideal Candidate: · Possesses a strong track record of peer-reviewed publications. · Holds a PhD in molecular and cellular neuro/glial biology with a focus on metabolism How to Apply: Email your application directly to me. Arrange for three letters of reference to be sent directly to my attention. Explore our science at sahaylab.com/publications to learn how it informs our understanding of the neurobiology of cognition in neurodevelopmental disorders, aging, and Alzheimer’s disease (AD). Visit sahaylab.com/the-team to see the success of trainees from the lab (academia, industry, K99s etc). We look forward to reviewing your application and learning more about your background.
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Fantastic new story by the Sahay lab on parvalbumin interneurons plasticity regulating hippocampal circuit function, with direct implications for NDDs...many congrats Amar and team!
Excited to share our discovery of a convergent mechanism for cognitive restoration and seizure suppression in neurodevelopment disorders published on this day of a total solar eclipse, August 12, 2026 (“Procognitive restoration of PV neuron plasticity in neurodevelopmental disorders”, Open Access in Nature nature.com/articles/s41586-0…). This work was spearheaded by two amazing neuroscientists, Yu-Tzu Shih PhD (Assistant Professor, TBA) and @Jason_Alipio, + other major contributors from the Sahay lab: @al0k_91 (in vivo physiology), Nathaniel Green (ensemble tagging) and terrific collaborators, @DullaChris and Zin-Juan Klaft PhD (Tufts, ECoG recordings), @omarahmedlab (University of Michigan, SWR analysis), @Hyun_neuron_10Jung(DGIST, reagents). Background and the Challenge Cognitive impairment and seizures are hallmarks of neurodevelopmental disorders or NDDs and represent a large clinical unmet need. Significant advances in the genetics of neurodevelopmental disorders have identified high confidence risk genes for autism spectrum disorder (many of which define rare diseases, sfari.org), bipolar disorder, schizophrenia and epilepsy. Additionally, these sequencing efforts have revealed shared genetic architectures underlying these NDDs. Two major challenges emerge from these findings. First, defining circuit-based instantiations of shared genetic architectures as they relate to cognition and regulation of network excitability. Second, identifying convergent circuit mechanisms that may be reinstated for cognitive restoration and seizure suppression in NDDs. The discovery Impaired experience-dependent refinement of inhibitory circuits during the early postnatal period is thought to contribute to NDDs. Parvalbumin inhibitory neurons (PV INs) dynamically change their intrinsic excitability, input-output connectivity, synaptic physiology and synaptic plasticity in response to experience (referred to here as “Experience-dependent parvalbumin inhibitory neuron plasticity”)to precisely control neuronal spiking, neuronal ensembles, network oscillations and network excitability. Our knowledge of regulators of experience-dependent parvalbumin inhibitory neuron plasticity in the hippocampus is scant. In a first of its kind input-specific translatome screen designed to identify regulators of experience-dependent parvalbumin inhibitory neuron plasticity or XPGs in the adult hippocampus (region CA3/CA2) of mice, we discovered a large suite of ultra-high confidence risk genes for ASD, bipolar disorder, schizophrenia and epilepsy as candidate XPGs. Many of these candidate XPGs encode for transcription factors and chromatin regulators whose functions in PV INs are not known. The expression of these XPGs is negligibly low but is upregulated by experience. Understanding how XPGs in the hippocampus control PV IN properties, feed-forward inhibition, and synaptic plasticity will generate insights into formation and storage of spatial and social memories, as well as hippocampal communication with different brain regions to calibrate many different behaviors including social behavior. We show in proof-of-concept studies that selectively expressing one candidate XPG, the transcription factor Meis2, in PV INs of hippocampal subregion CA3/CA2 in a widely used NDD risk mouse model is sufficient to re-instate experience-dependent parvalbumin inhibitory neuron plasticity and reverse developmental deficits in feed-forward inhibition, synaptic plasticity (iLTD), neuronal ensembles, sharp wave-ripples, spatial and social cognition. Boosting Meis2 expression in PV INs also suppressed seizures. MEIS2 regulates a module of genes encoding for chromatin regulators, synaptic proteins, synaptic adhesion molecules, cytoskeletal proteins, ion channels, and axon guidance factors that together define a distinct PV inhibitory neuron cell state. Is your favorite gene a candidate XPG? Check out our XPG NDD portal: XPG site: xpg-atlas.onrender.com/) Impact and next steps This study builds on our prior work and suggests that PV INs transition through distinct cell states in response to experience to expand the capacity for cognitive operations. Ongoing efforts are aimed at linking cell states with emergent network states. Deciphering the XPG code within PV INs will inform how PV INs toggle between different modes of inhibition (blanket vs. sculpted) of principal cells to dictate neuronal spiking, ensembles and sharp wave-ripples. Since the principal cell-PV IN-principal cell feed-forward inhibition motif is found in circuits supporting memory, sensory processing, cognitive flexibility, decision making and attention, targeting experience-dependent PV IN plasticity may impact different domains of cognition in NDDs and memory loss in aging and AD. The development of new therapeutics for NDDs is critically dependent on a deep understanding of mechanisms by which risk genes impair cognition and cause seizures. Our prior and ongoing studies in the hippocampus and work by others in sensory cortices suggest that PV IN hypofunction and impaired feed-forward inhibition are hallmarks of ASD and other NDDs. Our discovery creates a pathway for mechanism-to-therapeutic intervention using gene therapy for individuals who harbor loss of function mutations in XPGs, many of which define rare diseases, and who exhibit seizures and intellectual disability. We hope that our ongoing AI+Bio efforts to engage XPGs using different therapeutic modalities will ultimately enable us design, engineer and harness PV IN cell states for cognitive restoration in brain disorders. Stay tuned.
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🎉Very proud of our newly graduated Dr. Chihab in the lab, defending his PhD thesis (with teeth and nails!) on the role of mitochondrial fragmentation and ROS in astrocyte reactivity states during brain injury at @CECAD_ and @UniCologne! Many congrats!
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Many thanks also to @CRC_1218 and @UKKoeln for continuously supporting this project!!
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📢Our latest preprint on the role of mitochondria on neuronal function is out! We generated much needed new mouse models to manipulate transport in vivo, identifying GABAergic synapses for being particularly vulnerable to mitochondrial turnover rates. biorxiv.org/content/10.64898…
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The findings come with key implications for network excitability, seizure onset and disease-related MIRO1 and TRAK1 mutations. We also implement a systemic AAV-based approach to ameliorate epileptic phenotypes in mutant mice with disrupted mitochondrial transport.
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Many thanks to the whole lab for this work, collaborators, colleagues and funding! @CECAD_ ,@CRC_1218, @crc1451, @ERC_Research, @UniCologne
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Bergami Lab retweeted
Very excited & proud to share our new paper, now published in @CellStemCell!🧠🌱👇 Excited about all the discussions we invite with our work & proud of our incredibly ‘resilient’ team (spearheaded by @georgietos) and an outstanding group of collaborators who made this possible💜
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Bergami Lab retweeted
The EU just ruled to block another ambitious research proposal. It basically asks researchers not to generate ideas that would win big grants. And honestly, I do not understand the logic. This is a moment where Europe should be doubling down. More money for bold ideas. Faster translation from lab to market. Real support for the companies that could actually compete with the US and China in AI, biotech, and deep tech. We as Europe already have close to zero political leverage, because we lack powerhouse companies that have a global say…. Instead, we keep doing the opposite. We cut. We block. We water things down. I run an ERC project, and with my team I co-built Deep Piction, a biotech company funded by the EIC. I see how powerful European funding can be when it actually backs ambitious work. And I also see what the conservative reflex costs us every single time. Every “no” sends a message to scientists, young PIs, and founders: Europe is not the place to build your biggest idea. What worries me most is still the same point. Europe cannot reverse bad decisions fast enough. Once a restrictive ruling or a cut is in place, it stays. Everyone sees it is not working. Nothing changes. So my wish is simple. Back bigger ideas. Fund more, not less. Remove friction from great science and translation. Build a system that can admit “we got this wrong, let us fix it” in months, not decades. We have the talent. We have the science. We even have the companies starting to break through. What we keep failing to show is the institutional courage to actually bet on our own future. Are we really going to let another decade pass without fully powering science and translation? #Europe #ERC #Innovation #AI #Research #DeepTech
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🚀 We’re hiring! Staff Scientist / Postdoc – Tissue Clearing & 3D Image Analysis (m/f/d) (LMU Munich) Are you a great fit, or do you know someone outstanding, please reach out 🔁 If you want to at the frontier of whole-organ / whole-body 3D imaging, and help generate truly beautiful datasets that drive major biological discoveries and therapeutic development, see below ✨ We’re building the next-generation pipeline for tissue clearing + light-sheet microscopy + quantitative 3D analysis in the SyNergy Excellence Cluster (Mesoscale Hub) and we’re looking for someone excited to push this forward with us. 🧠🔬📈 🎥 I’m also attaching a short video showing the kind of high-quality imaging and datasets you’d be working with. What you’ll do 🛠️ 🔹 Lead and evolve tissue clearing + light-sheet workflows across collaborative SyNergy projects 🔹 Turn complex 3D datasets into robust quantitative insights (visualization, atlas registration, readouts) 🔹 Develop new methods and analysis pipelines together with our AI team 🤖 🔹 Maintain and optimize cutting-edge light-sheet systems (optional: support animal license writing) What we’re looking for 🎯 ✅ Strong hands-on experience in tissue clearing and/or fluorescence microscopy ✅ Solid experience with light-sheet microscopy and 3D imaging workflows ✅ Familiarity with 3D tools like Imaris / arivis Vision4D, stitching (e.g., BigStitcher), and quantitative analysis in cleared tissues ✅ Service mindset, great organization, and strong scientific English How to apply 📩 Apply via the LMU Klinikum online application form lnkd.in/gCgdaJuV Please also send your application to: [email protected] CC: [email protected] 📎 Include one PDF: short cover letter, CV, 2–3 referees, and earliest start date. 📍 Campus Großhadern (Munich) and Helmholtz Munich | 🕒 Full-time | 📅 Start: 01 January 2026 If you love high-quality imaging, cutting-edge biology, and building something that will matter, we’d love to hear from you. 🌍✨ #hiring #StaffScientist #Postdoc #TissueClearing #LightSheetMicroscopy #ImageAnalysis #SpatialBiology #Neuroscience #SyNergy #LMU #Munich
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In vivo CRISPR screen reveals regulation of macrophage states in neuroinflammation @NatureNeuro @LMU_Muenchen nature.com/articles/s41593-0…
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We seek a #PhD student to study the interplay between #gut #metabolism, the #microbiome and #development in #Drosophila. Experience in #omics highly valued! Details in the picture attached. Be part of our group in Heidelberg, Germany campus! Please RT 🙏
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New! Online now: Scale-spanning crosstalk between metabolism and information processing dlvr.it/TPKCDZ
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Bergami Lab retweeted
📢 📢Delighted to announce our latest pre-print co-led by our fantastic and talented postdocs @IreneFaravelli and @bolanosAnton 👩🏻‍🔬👩🏼‍🔬💪! Human cortical organoids record developmental time for 5 years in vitro. 🧫🧠⏳. A huge collaborative effort, big thanks to all co-authors! 🧵👇
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🧠✨ New preprint! We uncover a brain-specific immune vulnerability in metastasis: the MIF–CD74 axis rewires microglia/macrophages into a pro-metastatic state — and we show how to therapeutically reverse it. 🔗 biorxiv.org/cgi/content/shor…
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Functional synapses between neurons and small cell lung cancer | Nature | I am beyond excited to share that our work on innervation of SCLC tumors is finally out. Non of this would have been possible without an entire army of friends and collaborators. nature.com/articles/s41586-0…
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Following malignant transformation, small cell lung cancer cells hijack neuronal synaptic signaling to promote tumor growth @Nature @Stanford @BrighamWomens @humsav @michelle_monje 🇺🇸 nature.com/articles/s41586-0… @UniCologne 🇩🇪 nature.com/articles/s41586-0…
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